Find the best boat tours in Japan on Pelago. Plan and book online with the best prices and world class support.

The Best Boat tours in Japan | Updated February 2026

Japan

Enjoy a 20-minute river cruise through Osaka’s lively Dotonbori district with fun commentary and scenic waterfront views.

Glide along the Dotonbori River soaking in the dazzling neon lights and lively surrounding shops all while enjoying a delightful mini cruise that showcases the charm of Osaka Minami.

Feel the breeze in your hair on this open-top boat ride as you cruise along the glittering Dōtonbori River at night, passing iconic landmarks like the Glico Running Man, which has illuminated the canal district for over 80 years.

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See Okinawa’s tropical fish and coral reefs on a smooth 60-minute glass-bottom cruise from Naha—easy check-in, family-friendly, and fun for all ages.

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Explore Okinawa's underwater world on the "Orca" sightseeing boat with panoramic viewing windows and Naha skyline views.

Experience the beauty of Okinawa's underwater life aboard the Orca. Observe colorful fish and coral reefs through the glass bottom while enjoying a smooth dry cruise in paradise.

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Experience cherry blossoms framing the nostalgic train journey through Arashiyama a perfect blend of nature and travel showcasing the stunning scenery of Japan's seasonal beauty.

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Experience a picturesque evening on the Moby Dick Dinner Cruise savoring exquisite cuisine as the sun sets over the serene Okinawa waters. Perfect for creating lasting memories.

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Experience the stunning Uratomi Kaigan with its crystal-clear waters and dramatic rock formations perfect for exploring the beauty of Japan's San'in Coast. Endless opportunities for adventure await.

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Explore the poignant history of Hiroshima as you gaze upon the Atomic Bomb Dome surrounded by lush greenery and modern city life a perfect blend of remembrance and renewal.

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Experience the blend of traditional and modern Tokyo as you glide through historic streets and riversides savoring delicious tuna bowls and discovering the iconic Tsukiji Fish Market on this unforgettable bike tour.

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Experience the serene ride on the Captain Line connecting Osaka Aquarium and Universal Studios Japan while enjoying panoramic views of the Osaka waterfront from the open deck.

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Private Singapore airport transfers with 24-hour service, professional chauffeurs, and premium vehicles including Toyota Alphard and 13-seaters.

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The Best Boat tours in
Japan

Osaka Minami Dotonbori Tombori River Cruise Ticket Reservation

Glass Bottom Boat Tour Okinawa

Naha Large Underwater Sightseeing Boat Orca Ticket

Abashiri Drift Ice Sightseeing ＆ Icebreaker Ship "Aurora"

Gunkanjima island Cruise Experience | Nagasaki, Japan

Kyoto Hozugawa River Boat Ride, Sagano Romantic Train, Arashiyama Bamboo Grove Stroll | Depart from Kyoto Station | Japan

NEW Icebreakers GARINKO GO Ⅲ CRUISE and SOUNKYO ICE FALL FESTIVAL

Okinawa, Japan｜Moby Dick Cruises in Naha, Okinawa

Uratomi Coast Cruise, Tottori Sand Dunes, Sand Museum Tour

Full Day Hiroshima and Miyajima Tour by Bullet Train from Osaka

Tokyo Private Sightseeing Tour by Bike with Water Bus

THE KOBE CRUISE Concerto

Captain Line Boat Ticket | Aquarium West Pier ⇄ Universal Port

Factory Tour & Hands-On Tea Experience 【Marufuku Tea Company】

Dinner Cruise on HANAIKADA (Raft-Type Boat) with Scenic View of Miyajima

Shodoshima Island Ferry Tour from Kobe

4 Hours of Private Cruise on the Shimanami Kaido

The Peace Memorial to Miyajima : Icons of Peace and Beauty

Yokohama Private Tour

Explore the Nature that Inspired Ghibli Movies by Kayak (Half Day)