Find the best nature & wildlife tours in Japan on Pelago. Plan and book online with the best prices and world class support.

The Best Nature & Wildlife tours in Japan | Updated December 2025

Japan

Experience the unique sight of Japanese macaques soaking in natural hot springs surrounded by serene winter landscapes offering a delightful glimpse into their playful behavior and habitat.

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Experience the majesty of humpback whales breaching in Okinawa's clear waters where breathtaking marine encounters create unforgettable memories against a stunning backdrop of nature.

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Experience breathtaking views of humpback whales breaching as you cruise the azure waters of Okinawa capturing unforgettable memories with friends or family during this exclusive winter tour.

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Breathtaking views of Amanohashidate and Ine Bay await framed by cherry blossoms. Explore the floating fisherman’s village and savor a delicious meal while soaking in the serene landscape.

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Experience the stunning views of Mt. Fuji alongside the striking architecture of traditional pagodas perfect for creating unforgettable memories in Japan's iconic landscapes. Customize your journey for a personal touch.

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Experience the stunning majesty of Mt. Fuji while cruising on the pirate ship at Ashinoko Lake surrounded by lush greenery and breathtaking views. Perfect for adventurers and shoppers alike!

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Experience the majestic silhouette of Mt. Fuji framed by traditional architecture blending history and stunning views. A perfect slice of Japan awaits explorers ready for adventure.

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Surrounded by cherry blossoms explore Osaka's historic sights and serene landscapes while enjoying the luxury of a private car tour through the majestic temples and vibrant streets.

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Experience the stunning winter views from Mt. Gozaisho Ropeway where pristine snow-capped peaks meet breathtaking scenery creating unforgettable memories for every traveler. Enjoy the adventure!

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The Best Nature & Wildlife tours in
Japan

Day Trip to See the Snow Monkeys from Shinjuku with Lunch Buffet

Asahiyama Zoo, Fascinating Aoi-Ike Light Up in Winter!

Okinawa Whale Watching From Naha

Japan・Okinawa｜Kerama Islands Whale Watching｜Chinese and English support from Naha (free city pick-up)｜Japanese support from Chatan

[Winter Only] Kerama Islands Whale Watching Tour from Naha in Okinawa with Round-Trip Transfers & Photos | Japan

Osaka Day Tour: Amanohashidate & Ine Bay

Private Mount Fuji And Hakone Tour with English Guide

Explore Mt. Fuji Ice Cave in Aokigahara Forest

[Morning or Afternoon Departure] LeaLea Southern Okinawa Bus Tour - Sefa Utaki, Himeyuri Tower, Ryukyu Glass Village, & Valley of Gangara or Okinawa World | Departing from Naha

Departing from Takayama [Regular sightseeing bus] World Heritage Sites Shirakawago and Gokayama Ainokura

Mt. Fuji 5th Station, Owakudani Ropeway, Pirate Ship plus Outlet shopping!

1-Day Winter Tour From Nozawa Onsen: Snow Monkeys, Zenko-ji Temple & Sake

Mt Fuji, Takayama, Nagano Private Tour w Local guide/photographer

[Biei/Furano] One-day sightseeing by private car!

Hokkaido's Winter Awe-inspiring Drift Ice & Sounkyo Ice Sculpture!

Togakushi: A Serene Walk Through Sacred Forests & Soba Traditions

Tokyo: Mt.Fuji & Lake Kawaguchiko 1-Day Bus Tour w/Optional Lunch

Private Day Tour in Osaka and Kyoto with charter car

Mt. Gozaisho Ropeway,Nabana no Sato for Illumination and Begonia Garden!

From Tokyo to Nikko: Limited Express Tickets with Souvenir