Find the best nature & wildlife tours in Tokyo on Pelago. Plan and book online with the best prices and world class support.

The Best Nature & Wildlife tours in Tokyo | Updated December 2025

Tokyo

Experience the unique sight of Japanese macaques soaking in natural hot springs surrounded by serene winter landscapes offering a delightful glimpse into their playful behavior and habitat.

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Experience the stunning views of Mt. Fuji alongside the striking architecture of traditional pagodas perfect for creating unforgettable memories in Japan's iconic landscapes. Customize your journey for a personal touch.

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Experience the majestic silhouette of Mt. Fuji framed by traditional architecture blending history and stunning views. A perfect slice of Japan awaits explorers ready for adventure.

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Experience the stunning majesty of Mt. Fuji while cruising on the pirate ship at Ashinoko Lake surrounded by lush greenery and breathtaking views. Perfect for adventurers and shoppers alike!

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Enjoy a self-guided full-day journey through Hakone with included train tickets and a Hakone Free Pass.

Experience stunning fall foliage as you glide above the landscape on the Hakone Ropeway immersing yourself in the beauty of nature and the allure of Japan's scenic wonders.

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Immerse in Japan’s serene countryside where autumn leaves reflect on tranquil waters. Discover hidden waterfalls ancient shrines and the warmth of local hospitality in this peaceful escape.

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Experience the serene beauty of Matsushima Bay where unique islands and historic temples invite exploration. Enjoy the scenic ferry ride and indulge in local delicacies at your own pace.

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Experience the serenity of Mt. Fuji from stunning vantage points exploring hidden locations while savoring gourmet meals creating unforgettable memories in Japan's spiritual heartland.

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Discover the serene beauty of Meiji Shrine's wooden torii gate surrounded by lush greenery symbolizing Japan's deep connection to nature and tradition on this unforgettable tour.

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Experience the beauty of nature while savoring unblended Hakushu Single Malt Whisky crafted with care at one of Japan’s renowned distilleries creating unforgettable memories in every sip.

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Experience the charm of Mt. Takao as you hike surrounded by stunning vistas historic sites and vibrant foliage perfect for a refreshing day connecting with nature.

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Explore the haunting remnants of a community reshaping its future near the Fukushima Daiichi Nuclear Power Plant. Each step reveals stories of resilience amidst nature reclaiming its space.

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Explore the beauty of cherry blossoms framing the historic architecture of the Imperial Palace. Experience Japan's vibrant culture and rich history in this serene garden setting.

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The Best Nature & Wildlife tours in
Tokyo

Day Trip to See the Snow Monkeys from Shinjuku with Lunch Buffet

Private Mount Fuji And Hakone Tour with English Guide

Mt Fuji, Takayama, Nagano Private Tour w Local guide/photographer

Private Tour to Mt Fuji, Lake Kawaguchi with Limousine and Driver

From Tokyo to Nikko: Limited Express Tickets with Souvenir

Mt. Fuji 5th Station, Owakudani Ropeway, Pirate Ship plus Outlet shopping!

From Tokyo to Hakone: Train Tickets and Hakone Free Pass

Tokyo Countryside Exploration Private Tour

Day Trip to Sendai Matsushima (Shinkansen Tickets & Boat Ticket)

Classic Shizuoka with Mt.Fuji view 1 Day Private Shore Excursion

Fuji Spiritual Private Tour with Lunch and Dinner

Private, personalized tour of Tokyo with a guide in Spanish

Suntory whisky distillery tasting day tour for VIP from Tokyo

Full Day Hiking Tour at Mt.Takao including Hot Spring

Fukushima Daiichi Nuclear Power Plant visit 2 day tour

Tokyo, East Garden of the Imperial Palace w/ History Guide

Mt.Fuji Chartered Taxi Tour