Find the best boat tours in Japan on Pelago. Plan and book online with the best prices and world class support.

The Best Boat tours in Japan | Updated December 2025

Japan

Enjoy a 20-minute river cruise through Osaka’s lively Dotonbori district with fun commentary and scenic waterfront views.

Glide along the Dotonbori River soaking in the dazzling neon lights and lively surrounding shops all while enjoying a delightful mini cruise that showcases the charm of Osaka Minami.

Feel the breeze in your hair on this open-top boat ride as you cruise along the glittering Dōtonbori River at night, passing iconic landmarks like the Glico Running Man, which has illuminated the canal district for over 80 years.

osaka-minami-dotonbori-tonbori-river-cruise-ticket-reservation-osaka_1

Explore Okinawa's underwater world on the "Orca" sightseeing boat with panoramic viewing windows and Naha skyline views.

Experience the beauty of Okinawa's underwater life aboard the Orca. Observe colorful fish and coral reefs through the glass bottom while enjoying a smooth dry cruise in paradise.

naha-orca-cruise-underwater-sightseeing-e-ticket-okinawa_1

See Okinawa’s tropical fish and coral reefs on a smooth 60-minute glass-bottom cruise from Naha—easy check-in, family-friendly, and fun for all ages.

okinawa-glass-bottom-boat-tour_1

Experience cherry blossoms framing the nostalgic train journey through Arashiyama a perfect blend of nature and travel showcasing the stunning scenery of Japan's seasonal beauty.

kyoto-hozugawa-river-boat-ride-sagano-romantic-train-arashiyama-bamboo-grove-stroll-depart-from-kyoto-station-japan_1

Experience the stunning natural beauty of Hozu Valley while drifting down the serene river surrounded by majestic mountains and lush greenery perfect for every season.

arashiyama-hozu-river-boat-ride-e-ticket-kyoto_1

Glide through the heart of Osaka along the Dotonbori where dazzling neon lights and lively scenery create a unique perspective of this iconic waterway revealing hidden gems along the journey.

osaka-dotonbori-wonder-cruise_1

gunkanjima-island-cruise-experience-nagasaki-japan_1

Breathtaking views of Amanohashidate and Ine Bay await framed by cherry blossoms. Explore the floating fisherman’s village and savor a delicious meal while soaking in the serene landscape.

hidden-gems-amanohashidate-ine-bay-cruise-experience-from-osaka_1

kyushu-yanagawa-river-cruise-japan_1

Experience the serene ride on the Captain Line connecting Osaka Aquarium and Universal Studios Japan while enjoying panoramic views of the Osaka waterfront from the open deck.

osaka-aquarium-universal-studios-japan-captain-line_1

Experience a unique perspective of Tokyo as you glide past iconic landmarks like the Rainbow Bridge and Tokyo Skytree all while enjoying a leisurely water bus ride.

tokyo-water-bus-asakusa-odaiba-direct-line-tokyo-mizube-cruising-line_1

visit-gunkanjima-island-battleship-island-in-nagasaki_1

yaeyama-islands-day-tour-iriomote-yubu-taketomi-okinawa_1

shiretoko-sightseeing-cruise-aurora_1

hakata-departure-yanagawa-one-day-yokabus-sightseeing-tour-river-boat-ride-eel-steaming-miso-making-experience-at-a-long-established-store-take-home-the-finished-miso-fukuoka-japan_1

Experience the stunning Uratomi Kaigan with its crystal-clear waters and dramatic rock formations perfect for exploring the beauty of Japan's San'in Coast. Endless opportunities for adventure await.

Get 10% off on the app with promo code APP10

The Best Boat tours in
Japan

Osaka Minami Dotonbori Tombori River Cruise Ticket Reservation

Naha Large Underwater Sightseeing Boat Orca Ticket

Glass Bottom Boat Tour Okinawa

Kyoto Hozugawa River Boat Ride, Sagano Romantic Train, Arashiyama Bamboo Grove Stroll | Depart from Kyoto Station | Japan

Hozugawa River Boat Ride Experience in Arashiyama, Kyoto

Osaka Dotonbori Wonder Cruise

Gunkanjima island Cruise Experience | Nagasaki, Japan

Osaka Day Tour: Amanohashidate & Ine Bay

Kyushu Yanagawa River Cruise｜Japan

Osaka Aquarium-Universal Studios Japan Captain Line

Tokyo, Japan｜Ryogoku/Asakusa - Odaiba Tokyo Mizube Line Water Bus

Visit Gunkanjima Island (Battleship Island) in Nagasaki

Okinawa, Japan Island Hopping Day Tour｜Iriomote Island & Yubu Island｜Depart from Ishigaki Island

Abashiri Drift Ice Sightseeing ＆ Icebreaker Ship "Aurora"

[Hakata departure] Yanagawa one-day YokaBus sightseeing tour | River Cruise & Unagi Seiro-Mushi at a Historic Restaurant & Miso-Making Experience - Take Home Your Handmade Miso! (Fukuoka, Japan)

Uratomi Coast Cruise, Tottori Sand Dunes, Sand Museum Tour

NEW Icebreakers GARINKO GO Ⅲ CRUISE and SOUNKYO ICE FALL FESTIVAL

[Fukuoka Water Bus] Fukuoka Hakata Bay Nakasu Water Bus

Amakusa Dolphin Viewing Sea Cruise Ticket | Kumamoto

Dotonbori Glico Signature Cruise in Osaka, Japan｜20-minute sightseeing experience